BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B07LP1|AL425641
(753 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1453 535 e-152
>3x_Contig1453
Length = 8444
Score = 535 bits (269), Expect = e-152
Identities = 327/347 (94%)
Strand = Plus / Minus
Query: 4 cctatgatgaagcaacatcccttattttattgatgttagtaggcttcttttacttccgac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cctatgatgaagcaacatcccttattttattgatgttagtaggcttcttttacttccgac 615
Query: 64 gtttgaagggaacaatatatccgtaaggcttatagttcatactgcacataatttttagat 123
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 614 gtttgaagggaacaatatatccgtaatccttatagttcatactgcacataatttttaaat 555
Query: 124 tgtsattttaagcttggcataaatatgttaggaaataggaaaatatttgagcttctaaaa 183
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgtcattttaagcttggcataaatatgttaggaaataggaaaatatttgagcttctaaaa 495
Query: 184 cgactcttaactgtttattcccagaatcaatccggagaactatttgattactaagtttaa 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cgactcttaactgtctattcccagaatcaatccggagaactatttgattactaagtttaa 435
Query: 244 atgcttctagacaagtttcaactgcccatgagggggggcataccaatgtgcaagtkcaag 303
||||||||||||||||||||||||||||||||||| ||||||||| | ||| | |||
Sbjct: 434 atgcttctagacaagtttcaactgcccatgaggggtttcataccaattttcaattccaat 375
Query: 304 ttttctagtcatctctttcatttttctaatttttgatagcaaaatta 350
||||||| |||||||| |||| | || ||||||| ||| ||||||||
Sbjct: 374 ttttctattcatctctctcatctatcaaattttttatatcaaaatta 328
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5892
Number of Sequences: 1807
Number of extensions: 5892
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 753
length of database: 10,358,551
effective HSP length: 16
effective length of query: 737
effective length of database: 10,329,639
effective search space: 7612943943
effective search space used: 7612943943
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)